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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918009.1_cds_XP_016467541.1_60278
CDS Infomation

[gene=LOC107790150] [db_xref=GeneID:107790150] [protein=IAA-amino acid hydrolase ILR1-like 3] [protein_id=XP_016467541.1] [location=complement(join(90902..91282,91563..91691,91810..92124,92211..92336,93811..94161))] [gbkey=CDS]
Sequence

ATGGGTTCTTTTCGTACAGACTACTTTTTCTGCATATTGGCATTGGTATCAACAATATCT
CCTTACAATTCATGGGCTGTAGATACTGAATCCCTAACTCGGGTGCTTCTTGAATCGGCG
AGGCAGCCGGAGTTTTATGATTGGTTGAAAAGGGTAAGGAGGAGAATCCATGAGTACCCG
GAATTGGCATTTCAAGAACACCGAACGAATCAACTAATCCGAGATGAGCTGGACGCACTC
GGGATCAAGTACCTGTCCCCAGTCGCTAAAACTGGTTTGGTTGGAACCATTGGGTCAGGT
GGTCAGCCATGGTTCGGTTTGAGAGCTGACATGGATGCTCTCCCTATTCAGGAATTGGTA
GATTGGGAGTATAAAAGCAAGATCGATGGCAAAATGCATGCATGTGGCCATGATGCTCAT
GTTACCATGCTGCTTGGAGCAGCTAGATTGCTTCAAAATAGAAGGGACAAGTTGAAGGGC
ACGGTTAAGCTTGTATTCCAACCTGGGGAAGAAGGCTATGCTGGCGCCTCCTATATGTTA
GAAGAAGGAGCATTAGATGAGGTTCAAGCAATATTTGGCATGCATGTCTGGCCATATATG
CCCACTGGTACTATTGGTTCGAGACCTGGTCCAATTATGGCTGGTGCGGGAAGGTTTACA
GCAACAATGCAAGGGAAAGGCGGACATGCAGCAATGCCACATACAACTAGAGATCCAATT
CTTGCTGTTTCTATGGCAGTTCTTGCACTCCAGCAACTTGTTTCTCGAGAAACTGATCCT
CTAGACTCTAGGGTTGTCTCTGTTGCATTTGTAGATGGTGGTCAAGCTGGAAATGTAATC
CCTGCAAGTGTACAGTTTGGTGGAACATTCCGGTTCTTGACATTTGAGGATTACTCCTAT
CTTAAGCAAAGGATCAAAGAGGTTATTGAGACACAAGCAGGCGTACATCGATGTTCTGCC
ACTATTGATTTTTCCGAGGAATTAATGAGGCCGTATCCACCAACTATAAATGATCCCATG
ATCTATGAGCATGCTAAAAAAGTTGGAGAAGTCTTGCTTGGTGAGCAAAACGTGCACTAT
GCTCCAATTACAATGGGTGCAGAGGACTTCAGCTTCTATTCCCAGAAGAAATCAGCTGCA
TTTTTTTACATTGGGGCACAAAACAAAACGGTCACGTCTACTGTTAGAGGTTTGCACTCC
CCCTACTTCACTATTGATGAAGATGTTCTTCCAATAGGAGCAGCTCTCCATGCTGCTGTT
GCCATCTCTCACTTTGATACACATGTTCAGACAGTAGAATAA

Peptide Sequence

PEP ID

XP_016467541.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Nicotiana tabacum]
Sequence

MGSFRTDYFFCILALVSTISPYNSWAVDTESLTRVLLESARQPEFYDWLKRVRRRIHEYP
ELAFQEHRTNQLIRDELDALGIKYLSPVAKTGLVGTIGSGGQPWFGLRADMDALPIQELV
DWEYKSKIDGKMHACGHDAHVTMLLGAARLLQNRRDKLKGTVKLVFQPGEEGYAGASYML
EEGALDEVQAIFGMHVWPYMPTGTIGSRPGPIMAGAGRFTATMQGKGGHAAMPHTTRDPI
LAVSMAVLALQQLVSRETDPLDSRVVSVAFVDGGQAGNVIPASVQFGGTFRFLTFEDYSY
LKQRIKEVIETQAGVHRCSATIDFSEELMRPYPPTINDPMIYEHAKKVGEVLLGEQNVHY
APITMGAEDFSFYSQKKSAAFFYIGAQNKTVTSTVRGLHSPYFTIDEDVLPIGAALHAAV
AISHFDTHVQTVE

Transcript Sequence

Gene sequence data has not been registered.